SMTL ID : 3cbx.1

The Dvl2 PDZ Domain in Complex with the C1 Inhibitory Peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 8 residues within 4Å: Chain A: I.37, G.38, P.54, G.55, W.99, K.100, W.101 Chain B: V.24 5 PLIP interactions: 1 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:V.24, A:W.99, A:W.99, A:W.101 Hydrogen bonds: A:G.38 MPD.2: 4 residues within 4Å: Chain A: S.39, W.101 Chain B: W.101, W.104 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:W.101, A:W.101, B:W.101, B:W.104 Hydrogen bonds: A:S.39

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: I.7, T.8, R.51 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Inhibition of Wnt signaling by Dishevelled PDZ peptides. Nat.Chem.Biol. (2009)

Release Date

2009-03-03

Peptides

Dishevelled-2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dishevelled-2