SMTL ID : 3cfb.1 (1 other biounit)

High-resolution structure of blue fluorescent antibody EP2-19G2 in complex with stilbene hapten at 100K

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: K.44, Q.50, G.62, P.64, F.67, E.86, D.87 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.44, A:Q.50, A:Q.50, A:G.62, A:D.87, A:D.87 GOL.2: 4 residues within 4Å: Chain A: D.1, I.2, K.27, E.98 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.1, A:K.27 Water bridges: A:I.2, A:E.98, A:E.98 GOL.3: 7 residues within 4Å: Chain A: H.31, N.33, Y.37, N.96, L.97 Chain B: Q.99 Ligands: SPB.4 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:H.31, A:N.33, A:L.97, B:Q.99

1 x SPB: 4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC ACID(Non-covalent)

SPB.4: 17 residues within 4Å: Chain A: Y.39, N.96, L.97, E.98, L.99, P.101, F.103 Chain B: I.33, S.35, V.37, L.45, Y.94, A.96, G.98, Q.99, W.104 Ligands: GOL.3 15 PLIP interactions: 11 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:I.33, B:V.37, B:L.45, B:Y.94, B:A.96, B:Q.99, B:W.104, A:N.96, A:L.99, A:P.101, A:F.103 Hydrogen bonds: B:Q.99 Water bridges: B:G.98 pi-Stacking: B:W.104, B:W.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Debler, E.W. et al., Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex. Science (2008)

Release Date

2008-03-18

Peptides

BLUE FLUORESCENT ANTIBODY EP2-19G2-KAPPA LIGHT CHAIN: A
BLUE FLUORESCENT ANTIBODY EP2-19G2-IGG2B HEAVY CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BLUE FLUORESCENT ANTIBODY EP2-19G2-KAPPA LIGHT CHAIN

BLUE FLUORESCENT ANTIBODY EP2-19G2-IGG2B HEAVY CHAIN

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