SMTL ID : 3cho.1

Crystal structure of leukotriene a4 hydrolase in complex with 2-amino-N-[4-(phenylmethoxy)phenyl]-acetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.295, H.299, E.318, Y.383 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.295, A:H.299, A:E.318, A:E.318, H2O.1

1 x YB: YTTERBIUM (III) ION(Non-covalent)

YB.2: 2 residues within 4Å: Chain A: D.481 Ligands: ACT.3 5 PLIP interactions: 1 interactions with chain A, 1 Ligand-Ligand interactions, 3 Ligand-Water interactions Metal complexes: A:D.481, ACT.3, H2O.23, H2O.23, H2O.23

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 3 residues within 4Å: Chain A: K.479, D.481 Ligands: YB.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.479 Water bridges: A:K.479

1 x 4BG: N-[4-(benzyloxy)phenyl]glycinamide(Non-covalent)

4BG.4: 15 residues within 4Å: Chain A: Q.134, Q.136, A.137, Y.267, G.269, M.270, W.311, F.314, V.367, L.369, P.374, D.375, A.377, Y.378, Y.383 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Q.136, A:A.137, A:F.314, A:F.314, A:F.314, A:V.367, A:L.369, A:A.377, A:Y.378, A:Y.378 Hydrogen bonds: A:Y.267, A:G.269, A:Y.383 Water bridges: A:Q.136, A:Y.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kirkland, T.A. et al., Synthesis of glutamic acid analogs as potent inhibitors of leukotriene A4 hydrolase. Bioorg.Med.Chem. (2008)

Release Date

2008-04-22

Peptides

Leukotriene A-4 hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Leukotriene A-4 hydrolase

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