SMTL ID : 3ci6.1

Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

2 x P4G: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE(Non-covalent)

P4G.1: 7 residues within 4Å: Chain A: M.7, Q.8, T.11, A.39, S.143, A.145, A.146 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.8, A:S.143 P4G.4: 6 residues within 4Å: Chain B: L.25, L.49, D.51, L.58, A.164, H.165 1 PLIP interactions: 1 interactions with chain B Water bridges: B:N.54

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 7 residues within 4Å: Chain A: L.50, E.52, E.89, R.126, K.127, V.128 Ligands: GOL.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.52, A:R.126, A:V.128 PEG.5: 3 residues within 4Å: Chain B: L.106, P.107, G.110 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.110

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: E.89, R.126 Ligands: PEG.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.126 GOL.6: 4 residues within 4Å: Chain B: S.74, L.75, Q.76, E.79 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.76, B:E.79 Water bridges: B:S.74, B:L.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuff, M.E. et al., Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase. TO BE PUBLISHED

Release Date

2008-05-13

Peptides

Phosphoenolpyruvate-protein phosphotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphoenolpyruvate-protein phosphotransferase