SMTL ID : 3cis.1 (3 other biounits)

The Crystal Structure of Rv2623 from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

4 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 1 residues within 4Å: Ligands: ATP.3 No protein-ligand interaction detected (PLIP) MG.2: 2 residues within 4Å: Chain A: D.210 Ligands: ATP.4 No protein-ligand interaction detected (PLIP) MG.5: 3 residues within 4Å: Chain B: S.133, G.134 Ligands: ATP.7 No protein-ligand interaction detected (PLIP) MG.6: 3 residues within 4Å: Chain B: D.210, V.289 Ligands: ATP.8 No protein-ligand interaction detected (PLIP)

4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.3: 24 residues within 4Å: Chain A: G.25, I.26, D.27, S.29, A.32, V.53, H.54, A.55, A.112, L.116, V.128, G.129, C.130, L.131, G.132, S.133, G.134, R.135, R.139, G.142, S.143, V.144, S.145 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:S.29, A:H.54, A:A.55, A:A.55, A:G.129, A:L.131, A:G.132, A:G.134, A:S.143, A:V.144, A:S.145 Water bridges: A:S.133, A:S.143, A:S.143 Salt bridges: A:R.139, A:R.139 ATP.4: 22 residues within 4Å: Chain A: G.177, V.178, D.179, S.184, L.205, H.206, A.207, D.210, P.257, V.273, G.274, R.276, G.277, R.278, G.279, G.280, M.284, G.287, S.288, V.289, G.290 Ligands: MG.2 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.184, A:A.207, A:A.207, A:D.210, A:G.274, A:R.276, A:G.277, A:R.278, A:G.279, A:G.280, A:S.288, A:V.289, A:G.290 Salt bridges: A:R.276 ATP.7: 23 residues within 4Å: Chain B: G.25, I.26, D.27, S.29, A.32, V.53, H.54, A.55, A.112, L.116, V.128, G.129, L.131, G.132, S.133, G.134, R.135, R.139, G.142, S.143, V.144, S.145 Ligands: MG.5 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:D.27, B:S.29, B:A.55, B:A.55, B:G.129, B:L.131, B:G.132, B:S.133, B:G.134, B:S.143, B:V.144, B:S.145 Salt bridges: B:R.139, B:R.139 ATP.8: 23 residues within 4Å: Chain B: G.177, V.178, D.179, S.181, S.184, L.205, H.206, A.207, D.210, P.257, V.273, G.274, R.276, G.277, R.278, G.279, G.280, M.284, G.287, S.288, V.289, G.290 Ligands: MG.6 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:D.179, B:S.181, B:S.184, B:A.207, B:A.207, B:G.274, B:R.276, B:G.277, B:R.278, B:G.279, B:G.280, B:S.288, B:V.289, B:G.290 Water bridges: B:S.288 Salt bridges: B:R.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Drumm, J. et al., The Crystal Structure of Rv2623 : a Novel, Tandem-Repeat Universal Stress Protein of Mycobacterium tuberculosis. To be Published

Release Date

2009-03-17

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein

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