SMTL ID : 3coq.1

Structural Basis for Dimerization in DNA Recognition by Gal4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 7 residues within 4Å: Chain A: A.11, G.12, T.13 Chain B: T.11, G.12, T.13 Chain C: L.42 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:L.42

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain C: C.4, C.7, C.14, C.21 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.4, C:C.7, C:C.14, C:C.21 ZN.3: 5 residues within 4Å: Chain C: C.4, C.21, C.24, C.31 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.4, C:C.21, C:C.24, C:C.31 ZN.4: 5 residues within 4Å: Chain D: C.4, C.7, C.14, C.21 Ligands: ZN.5 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.4, D:C.7, D:C.14, D:C.21 ZN.5: 5 residues within 4Å: Chain D: C.4, C.21, C.24, C.31 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.4, D:C.21, D:C.24, D:C.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, M. et al., Structural basis for dimerization in DNA recognition by gal4. Structure (2008)

Release Date

2008-07-01

Peptides

Regulatory protein GAL4: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Regulatory protein GAL4