SMTL ID : 3crn.1

Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: D.11, D.54, K.56 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.56 Water bridges: A:D.12 NA.4: 3 residues within 4Å: Chain B: D.11, D.54, K.56 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.11 NA.5: 2 residues within 4Å: Chain A: A.98 Chain B: A.98 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.98 NA.6: 2 residues within 4Å: Chain B: P.74, M.76 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.99

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: L.3, K.4, E.26, G.27, Y.28 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.4, A:K.4, A:E.26 Water bridges: A:Y.28 GOL.3: 7 residues within 4Å: Chain A: Y.101, I.102, M.103, D.110, K.114 Chain B: V.91, N.95 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:N.95, A:D.110, A:K.114 Water bridges: B:V.91 GOL.7: 5 residues within 4Å: Chain B: L.3, K.4, E.26, G.27, Y.28 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.4, B:E.26, B:E.26 GOL.8: 7 residues within 4Å: Chain A: H.70, N.95, A.96, G.97 Chain B: E.117, K.118, E.121 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:E.117, B:K.118 Water bridges: B:K.114, B:K.118, A:N.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hiner, R.L. et al., Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1. To be Published

Release Date

2008-04-22

Peptides

Response regulator receiver domain protein, CheY-like: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Response regulator receiver domain protein, CheY-like