SMTL ID : 3cvl.1

Structure of Peroxisomal Targeting Signal 1 (PTS1) binding domain of Trypanosoma brucei Peroxin 5 (TbPEX5)complexed to T. brucei Phosphofructokinase (PFK) PTS1 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x GLU- LEU- ALA- LYS- LEU: T. brucei PFK PTS1 peptide Ac-HEELAKL(Non-covalent)

GLU-LEU-ALA-LYS-LEU.1: 17 residues within 4Å: Chain A: E.69, V.97, T.100, N.101, N.183, N.210, K.211, A.214, T.215, A.217, N.218, Y.229, R.241, Y.244, N.245, V.248, N.252 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.97, A:T.100, A:N.183, A:K.211, A:A.217, A:V.248 Hydrogen bonds: A:N.101, A:N.101, A:N.210, A:N.218, A:N.218, A:Y.244, A:N.245, A:N.245, A:N.252, A:N.252 Salt bridges: A:K.211, A:R.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sampathkumar, P. et al., Structural Insights into the recognition of peroxisomal targeting signal 1 by Trypanosoma brucei peroxin 5. J.Mol.Biol. (2008)

Release Date

2008-06-24

Peptides

Peroxisome targeting signal 1 receptor PEX5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome targeting signal 1 receptor PEX5

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