SMTL ID : 3cy5.3 (2 other biounits)

Crystal structure determination of buffalo (Bubalus bubalis) hemoglobin at 2 angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 19 residues within 4Å: Chain A: T.39, Y.42, F.43, H.45, F.46, H.58, K.61, V.62, A.65, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 22 PLIP interactions: 21 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:T.39, A:Y.42, A:Y.42, A:Y.42, A:V.62, A:A.65, A:L.83, A:L.91, A:L.91, A:V.93, A:F.98, A:F.98, A:L.101, A:V.132, A:L.136 Water bridges: A:H.58 Salt bridges: A:H.45, A:H.58, A:K.61 pi-Stacking: A:H.58 Metal complexes: A:H.87, H2O.1 HEM.2: 17 residues within 4Å: Chain B: T.37, F.40, F.41, H.62, K.65, S.69, F.70, L.87, L.90, H.91, L.95, V.97, N.101, F.102, L.105, V.136, L.140 22 PLIP interactions: 21 interactions with chain B, 1 Ligand-Water interactions Hydrophobic interactions: B:T.37, B:F.40, B:F.40, B:F.41, B:F.41, B:F.70, B:F.70, B:L.87, B:L.87, B:L.90, B:L.95, B:V.97, B:N.101, B:F.102, B:L.105, B:V.136, B:L.140 Salt bridges: B:H.62, B:K.65 pi-Stacking: B:H.62 Metal complexes: B:H.91, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balasubramanian, M. et al., Crystal structure determination of hemoglobin from Buffalo (Bubalus bubalis) at 2 angstrom resolution. To be Published

Release Date

2009-04-28

Peptides

Hemoglobin subunit alpha-2: A
Hemoglobin subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Hemoglobin subunit alpha-2

Hemoglobin subunit beta

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