SMTL ID : 3d1a.1

Crystal Structure Determination of Goat Hemoglobin at 2.61 Angstrom Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: T.40, Y.43, F.44, H.46, F.47, H.59, K.62, A.66, L.84, H.88, L.92, V.94, N.98, F.99, L.102, V.133, L.137 18 PLIP interactions: 17 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:T.40, A:Y.43, A:F.47, A:L.84, A:L.84, A:L.92, A:V.94, A:V.94, A:N.98, A:F.99, A:F.99, A:L.102, A:V.133, A:L.137 Salt bridges: A:H.46, A:H.59, A:K.62 Metal complexes: H2O.1 HEM.2: 18 residues within 4Å: Chain B: F.40, F.41, H.43, F.44, H.62, K.65, V.66, S.69, L.87, L.90, H.91, L.95, V.97, N.101, F.102, L.105, V.136, L.140 22 PLIP interactions: 21 interactions with chain B, 1 Ligand-Water interactions, Hydrophobic interactions: B:F.40, B:F.40, B:F.41, B:F.41, B:F.41, B:F.44, B:V.66, B:L.87, B:L.90, B:L.95, B:V.97, B:V.97, B:N.101, B:F.102, B:L.105, B:V.136, B:L.140 Salt bridges: B:H.43, B:K.58 pi-Stacking: B:H.91 Metal complexes: B:H.91, H2O.2 HEM.3: 18 residues within 4Å: Chain C: M.33, T.40, Y.43, F.44, H.46, F.47, H.59, K.62, A.66, L.84, L.87, H.88, L.92, V.94, N.98, F.99, L.102, L.137 16 PLIP interactions: 15 interactions with chain C, 1 Ligand-Water interactions, Hydrophobic interactions: C:Y.43, C:A.66, C:L.84, C:L.92, C:V.94, C:N.98, C:F.99, C:F.99, C:L.102, C:L.102, C:L.137 Water bridges: C:H.59 Salt bridges: C:H.46, C:K.62 pi-Stacking: C:H.59 Metal complexes: H2O.3 HEM.4: 18 residues within 4Å: Chain D: T.37, F.40, F.41, H.43, F.44, H.62, K.65, V.66, S.69, F.70, L.87, H.91, L.95, V.97, N.101, L.105, V.136, L.140 20 PLIP interactions: 19 interactions with chain D, 1 Ligand-Water interactions, Hydrophobic interactions: D:T.37, D:F.40, D:F.40, D:F.41, D:F.41, D:F.44, D:V.66, D:F.70, D:L.87, D:L.87, D:L.95, D:V.97, D:N.101, D:L.105, D:V.136, D:L.140 Salt bridges: D:H.43, D:K.58 pi-Stacking: D:H.62 Metal complexes: H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sathya Moorthy, P. et al., Crystal Structure determination of Goat hemoglobin at 2.61 Angstrom. To be Published

Release Date

2009-05-12

Peptides

Hemoglobin subunit alpha-1/2: AC
Hemoglobin subunit beta-A: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Hemoglobin subunit alpha-1/2

Hemoglobin subunit beta-A

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