SMTL ID : 3d1m.1 (1 other biounit)

Crystal Structure of Sonic Hedgehog Bound to the third FNIII domain of CDO

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.120, D.127, E.156, H.162 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.120, A:D.127, A:E.156, A:H.162, H2O.2, H2O.3

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: E.69, E.70, D.75, T.105, E.106 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.69, A:D.75, A:D.75, A:T.105, A:E.106 CA.3: 5 residues within 4Å: Chain A: E.70, E.106, D.109, D.111 Ligands: CA.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.70, A:E.106, A:D.109, A:D.111, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McLellan, J.S. et al., The mode of Hedgehog binding to Ihog homologues is not conserved across different phyla. Nature (2008)

Release Date

2008-09-23

Peptides

Sonic hedgehog protein: A
Cell adhesion molecule: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Sonic hedgehog protein

Cell adhesion molecule

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