SMTL ID : 3d2w.2 (1 other biounit)

Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-tetramer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: H.77 Chain B: T.2, T.3 3 PLIP interactions: 3 interactions with chain A Water bridges: A:H.77, A:S.79 Salt bridges: A:H.77 PO4.2: 3 residues within 4Å: Chain C: H.77 Chain D: T.2, T.3 3 PLIP interactions: 3 interactions with chain C Water bridges: C:S.79, C:S.79 Salt bridges: C:H.77 PO4.3: 3 residues within 4Å: Chain E: H.77 Chain F: T.2, T.3 3 PLIP interactions: 3 interactions with chain E Water bridges: E:H.77, E:S.79 Salt bridges: E:H.77 PO4.4: 3 residues within 4Å: Chain G: H.77 Chain H: T.2, T.3 3 PLIP interactions: 3 interactions with chain G Water bridges: G:S.79, G:S.79 Salt bridges: G:H.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuo, P.H. et al., Structural insights into TDP-43 in nucleic-acid binding and domain interactions. Nucleic Acids Res. (2009)

Release Date

2009-04-07

Peptides

TAR DNA-binding protein 43: ACEG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

G
A

TAR DNA-binding protein 43

Related Entries With Identical Sequence