SMTL ID : 3d4f.1

SHV-1 beta-lactamase complex with LN1-255

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x MA4: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE(Non-covalent)

MA4.1: 14 residues within 4Å: Chain A: I.217, V.220, P.222, I.227, I.241, L.245, V.255, I.257, I.273, A.274, G.277, A.278, I.281, E.282 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.217, A:V.220, A:I.227, A:I.241, A:L.245, A:V.255, A:I.257, A:I.273 Hydrogen bonds: A:V.220, A:E.282 Water bridges: A:S.22, A:S.22 MA4.2: 5 residues within 4Å: Chain A: T.231, R.239, N.270, I.273 Ligands: LN1.3 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:T.231, A:I.273

1 x LN1: (3R)-4-{[(3,4-dihydroxyphenyl)acetyl]oxy}-N-(2-formylindolizin-3-yl)-3-sulfino-D-valine(Covalent)

LN1.3: 13 residues within 4Å: Chain A: S.66, Y.101, S.126, V.212, A.213, L.216, K.230, T.231, G.232, A.233, R.239, N.270 Ligands: MA4.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.212, A:A.213, A:L.216 Hydrogen bonds: A:S.126, A:K.230, A:T.231 Water bridges: A:K.69, A:R.239, A:N.270 Salt bridges: A:R.239, A:R.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pattanaik, P. et al., Strategic Design of an Effective {beta}-Lactamase Inhibitor: LN-1-255, A 6-ALKYLIDENE-2'-SUBSTITUTED PENICILLIN SULFONE. J.Biol.Chem. (2009)

Release Date

2009-02-10

Peptides

Beta-lactamase SHV-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase SHV-1

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