SMTL ID : 3d4s.1

Cholesterol bound form of human beta2 adrenergic receptor.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x TIM: (2S)-1-(tert-butylamino)-3-[(4-morpholin-4-yl-1,2,5-thiadiazol-3-yl)oxy]propan-2-ol(Non-covalent)

TIM.1: 17 residues within 4Å: Chain A: W.117, T.118, D.121, V.122, V.125, T.126, F.201, Y.207, S.211, S.215, W.422, F.425, F.426, N.429, Y.444, N.448, Y.452 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.117, A:T.118 Hydrogen bonds: A:D.121, A:N.429, A:N.448, A:Y.452 pi-Stacking: A:F.426

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 8 residues within 4Å: Chain A: Y.78, T.81, S.82, C.85, R.159, I.162, W.166 Ligands: CLR.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.81, A:I.162, A:W.166, A:W.166, A:W.166 CLR.3: 8 residues within 4Å: Chain A: I.63, T.81, C.85, L.88, V.89, L.92, A.93 Ligands: CLR.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.63, A:T.81, A:L.88, A:V.89, A:V.89, A:L.92

3 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.4: 7 residues within 4Å: Chain A: V.134, V.137, F.141, L.152, L.153, I.161 Ligands: OLC.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.134, A:V.134, A:V.137, A:V.137 Water bridges: A:L.152 OLC.5: 7 residues within 4Å: Chain A: Y.140, F.141, V.221, F.225, V.226, R.229 Ligands: OLC.4 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.225, A:F.225, A:V.226 Hydrogen bonds: A:R.229, A:R.229 OLC.6: 5 residues within 4Å: Chain A: L.53, F.57, V.60, L.61, L.475 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.53, A:F.57, A:F.57, A:V.60 Water bridges: A:L.475

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanson, M.A. et al., A specific cholesterol binding site is established by the 2.8 A structure of the human beta2-adrenergic receptor. Structure (2008)

Release Date

2008-06-17

Peptides

Beta-2 adrenergic receptor/T4-lysozyme chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Beta-2 adrenergic receptor/T4-lysozyme chimera

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