SMTL ID : 3d66.2 (2 other biounits)

Crystal structure of Thrombin-Activatable Fibrinolysis Inhibitor (TAFI)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: Q.41, N.45 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.41, A:N.45 NAG.2: 5 residues within 4Å: Chain A: A.24, E.51, N.74, A.75, S.76 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.24 Hydrogen bonds: A:E.51, A:A.75, A:S.76 NAG.3: 1 residues within 4Å: Chain A: N.86 No protein-ligand interaction detected (PLIP) NAG.4: 3 residues within 4Å: Chain A: Q.105, N.109, E.399 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.108

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 4 residues within 4Å: Chain A: H.182, E.185, H.311, S.312 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.182, A:E.185, A:E.185, A:H.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marx, P.F. et al., Crystal structures of TAFI elucidate the inactivation mechanism of activated TAFI: a novel mechanism for enzyme autoregulation. Blood (2008)

Release Date

2008-07-01

Peptides

Carboxypeptidase B2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Carboxypeptidase B2

Related Entries With Identical Sequence