SMTL ID : 3d72.1

1.65 Angstrom crystal structure of the Cys71Val variant in the fungal photoreceptor VVD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 27 residues within 4Å: Chain A: I.39, C.41, N.72, C.73, R.74, L.76, Q.77, P.85, K.86, S.87, T.88, R.89, S.94, I.97, N.98, M.100, R.101, I.104, V.114, N.116, N.126, L.128, M.130, S.143, M.144, G.145, Q.147 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.39 Hydrogen bonds: A:N.72, A:C.73, A:R.74, A:Q.77, A:Q.77, A:K.86, A:S.87, A:R.89, A:R.89, A:N.98, A:N.116, A:N.116, A:N.126, A:Q.147 Water bridges: A:S.87, A:T.88, A:R.89 Salt bridges: A:R.74, A:K.86, A:K.86, A:R.89, A:R.89 FAD.2: 25 residues within 4Å: Chain B: I.39, C.41, N.72, C.73, R.74, L.76, Q.77, P.85, K.86, S.87, T.88, R.89, S.94, I.97, N.98, R.101, I.104, N.116, N.126, L.128, M.130, S.143, M.144, G.145, Q.147 25 PLIP interactions: 25 interactions with chain B Hydrophobic interactions: B:I.39, B:I.104 Hydrogen bonds: B:N.72, B:C.73, B:R.74, B:Q.77, B:K.86, B:S.87, B:R.89, B:R.89, B:N.98, B:N.116, B:N.116, B:N.126, B:Q.147 Water bridges: B:K.86, B:K.86, B:S.87, B:T.88, B:R.89 Salt bridges: B:R.74, B:K.86, B:K.86, B:R.89, B:R.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zoltowski, B.D. et al., Light activation of the LOV protein vivid generates a rapidly exchanging dimer. Biochemistry (2008)

Release Date

2008-06-17

Peptides

Vivid PAS protein VVD: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Vivid PAS protein VVD