SMTL ID : 3d8p.2 (1 other biounit)

Crystal structure of acetyltransferase of GNAT family (NP_373092.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.20 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: M.84, F.85, T.119, Y.130 Ligands: EDO.6, EDO.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.85 Water bridges: A:Y.130

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: E.16, E.19, F.20 Ligands: EDO.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.16 Water bridges: A:S.23, A:S.23 EDO.3: 5 residues within 4Å: Chain A: N.60, N.64, I.65, D.87, Y.90 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.60, A:I.65, A:D.87 Water bridges: A:D.87, A:Y.90 EDO.4: 7 residues within 4Å: Chain A: R.91, K.94, I.95, G.96, K.97, F.129 Ligands: EDO.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.96, A:K.97 Water bridges: A:K.94, A:I.95 EDO.5: 6 residues within 4Å: Chain A: F.85, V.86, R.91, F.123, A.126 Ligands: EDO.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.86, A:V.86 Water bridges: A:A.126 EDO.6: 6 residues within 4Å: Chain A: M.84, V.86, A.126 Ligands: ACT.1, EDO.4, EDO.5 No protein-ligand interaction detected (PLIP) EDO.7: 8 residues within 4Å: Chain A: Q.25, F.85, T.119, I.120, L.150, V.152, D.153 Ligands: ACT.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.25, A:D.153 Water bridges: A:K.83 EDO.8: 7 residues within 4Å: Chain A: F.20, S.23, I.24, D.87, K.88, R.91 Ligands: EDO.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.23, A:S.23, A:K.88, A:R.91 EDO.9: 3 residues within 4Å: Chain A: S.145, S.146, F.147 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of acetyltransferase of GNAT family (NP_373092.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.20 A resolution. To be published

Release Date

2008-10-28

Peptides

acetyltransferase of GNAT family: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

acetyltransferase of GNAT family

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