SMTL ID : 3dak.1 (2 other biounits)

Crystal Structure of Domain-Swapped OSR1 kinase domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-tetramer

Ligands

4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 15 residues within 4Å: Chain A: I.18, G.19, S.20, V.26, A.39, K.41, V.71, K.88, L.89, L.90, D.141, N.146, L.148, D.159 Ligands: MG.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:K.41, A:K.88, A:L.90, A:D.141, A:N.146, A:D.159 Water bridges: A:S.20, A:D.97, A:G.145 Salt bridges: A:K.41 ANP.3: 15 residues within 4Å: Chain B: I.18, G.19, V.26, A.39, K.41, V.71, M.87, K.88, L.89, L.90, K.143, N.146, L.148, D.159 Ligands: MG.4 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:K.88, B:L.90, B:N.146, B:N.146, B:D.159, B:D.159 Water bridges: B:I.18, B:K.143, B:K.143 Salt bridges: B:K.41 ANP.5: 15 residues within 4Å: Chain C: I.18, G.19, V.26, A.39, K.41, M.87, K.88, L.89, L.90, D.141, K.143, N.146, L.148, D.159 Ligands: MG.6 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:K.88, C:L.90, C:D.141, C:G.145, C:N.146, C:D.159 Water bridges: C:S.94, C:D.141, C:D.141, C:G.145 Salt bridges: C:K.41 ANP.7: 13 residues within 4Å: Chain D: I.18, G.19, V.26, A.39, K.41, V.71, M.87, K.88, L.89, L.90, L.148, D.159 Ligands: MG.8 10 PLIP interactions: 10 interactions with chain D Hydrogen bonds: D:K.41, D:K.88, D:L.90, D:D.141 Water bridges: D:S.94, D:S.94, D:D.141, D:N.146, D:D.159 Salt bridges: D:K.41

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: G.145, N.146, A.158, D.159 Ligands: ANP.1 No protein-ligand interaction detected (PLIP) MG.4: 4 residues within 4Å: Chain B: G.145, N.146, L.148 Ligands: ANP.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:G.145 MG.6: 5 residues within 4Å: Chain C: G.145, N.146, L.148, A.158 Ligands: ANP.5 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:G.145 MG.8: 4 residues within 4Å: Chain D: G.145, N.146, D.159 Ligands: ANP.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S.J. et al., Crystal structure of domain-swapped STE20 OSR1 kinase domain. Protein Sci. (2008)

Release Date

2009-02-10

Peptides

Serine/threonine-protein kinase OSR1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Serine/threonine-protein kinase OSR1

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