SMTL ID : 3dc4.1

Crystal structure of the Drosophila kinesin family member NOD in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: S.109, D.241 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.109, H2O.1, H2O.3, H2O.9, H2O.9

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 11 residues within 4Å: Chain A: R.29, P.32, Q.103, T.104, G.105, T.106, G.107, K.108, S.109, Y.110 Ligands: MG.1 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:R.29, A:G.105, A:T.106, A:T.106, A:G.107, A:K.108, A:S.109, A:Y.110 Water bridges: A:T.104, A:K.108 Salt bridges: A:K.108 pi-Stacking: A:Y.110, A:Y.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cochran, J.C. et al., ATPase cycle of the nonmotile kinesin NOD allows microtubule end tracking and drives chromosome movement. Cell(Cambridge,Mass.) (2009)

Release Date

2009-02-10

Peptides

Kinesin-like protein Nod: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kinesin-like protein Nod

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