SMTL ID : 3dfs.1

Dihydroxyacetone phosphate Schiff base intermediate in D33S mutant fructose-1,6-bisphosphate aldolase from rabbit muscle

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

homo-tetramer

Ligands

4 x 13P: 1,3-DIHYDROXYACETONEPHOSPHATE(Covalent)

13P.1: 11 residues within 4Å: Chain A: A.31, S.33, K.146, K.229, L.270, S.271, G.272, S.300, Y.301, G.302, R.303 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.31, A:K.229 Hydrogen bonds: A:S.33, A:K.146, A:S.271, A:S.271, A:S.271, A:G.272, A:G.302, A:R.303 Water bridges: A:R.303, A:R.303 Salt bridges: A:K.229, A:R.303 13P.2: 10 residues within 4Å: Chain B: A.31, K.146, K.229, L.270, S.271, G.272, S.300, Y.301, G.302, R.303 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:A.31, B:K.229 Hydrogen bonds: B:S.33, B:K.146, B:S.271, B:S.271, B:S.271, B:G.272, B:G.302, B:R.303 Water bridges: B:R.303 Salt bridges: B:K.229, B:R.303 13P.3: 11 residues within 4Å: Chain C: A.31, S.33, K.146, K.229, L.270, S.271, G.272, S.300, Y.301, G.302, R.303 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:A.31, C:K.229 Hydrogen bonds: C:S.33, C:K.146, C:S.271, C:S.271, C:S.271, C:G.272, C:G.302, C:R.303 Water bridges: C:S.33, C:R.303, C:R.303 Salt bridges: C:K.229, C:R.303 13P.4: 11 residues within 4Å: Chain D: A.31, S.33, K.146, K.229, L.270, S.271, G.272, S.300, Y.301, G.302, R.303 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:A.31, D:K.229 Hydrogen bonds: D:S.33, D:K.146, D:S.271, D:S.271, D:S.271, D:G.272, D:G.302, D:R.303 Water bridges: D:R.303, D:R.303 Salt bridges: D:K.229, D:R.303

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

St-Jean, M. et al., Charge stabilization and entropy reduction of central lysine residues in fructose-bisphosphate aldolase. Biochemistry (2009)

Release Date

2009-04-28

Peptides

Fructose-bisphosphate aldolase A: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fructose-bisphosphate aldolase A

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