SMTL ID : 3dlr.1

Crystal structure of the catalytic core domain from PFV integrase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.23, D.80 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.23, A:D.80, H2O.2, H2O.2, H2O.2 MG.2: 2 residues within 4Å: Chain B: D.23, D.80 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.23, B:D.80, H2O.4, H2O.4, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Valkov, E. et al., Functional and structural characterization of the integrase from the prototype foamy virus. Nucleic Acids Res. (2009)

Release Date

2008-12-09

Peptides

Integrase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Integrase