SMTL ID : 3dnf.1

Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x F3S: FE3-S4 CLUSTER(Non-covalent)

F3S.1: 9 residues within 4Å: Chain A: C.13, G.15, V.16, S.73, C.96, Y.98, T.165, C.193, A.195 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.13, A:C.96, A:C.193 F3S.3: 9 residues within 4Å: Chain B: C.13, F.14, G.15, V.16, C.96, Y.98, T.165, C.193, A.195 3 PLIP interactions: 3 interactions with chain B, Metal complexes: B:C.13, B:C.96, B:C.193

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: G.113, F.115, K.140, H.156, E.157, R.158 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.140, A:E.157, A:R.158, A:R.158 Water bridges: A:Y.114, A:K.140, A:H.156 GOL.4: 6 residues within 4Å: Chain B: G.113, F.115, K.140, H.156, E.157, R.158 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.140, B:K.140, B:E.157, B:R.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rekittke, I. et al., Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway. J.Am.Chem.Soc. (2008)

Release Date

2008-12-30

Peptides

4-hydroxy-3-methylbut-2-enyl diphosphate reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

4-hydroxy-3-methylbut-2-enyl diphosphate reductase