SMTL ID : 3dp5.1

Crystal structure of Geobacter sulfurreducens OmcF with N-terminal Strep-tag II

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.78, E.79, A.80, M.81 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.78, A:A.80, A:M.81 Water bridges: A:A.76, A:E.79, A:E.79

1 x HEC: HEME C(Non-covalent)

HEC.2: 21 residues within 4Å: Chain A: H.29, C.30, C.33, H.34, N.39, V.41, H.42, K.45, L.47, R.51, N.55, I.57, Y.66, I.67, G.71, P.72, G.73, M.74, P.75, F.77, I.90 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:V.41, A:H.42, A:K.45, A:L.47, A:I.57, A:Y.66, A:Y.66, A:I.67, A:F.77, A:I.90 Hydrogen bonds: A:N.55 Water bridges: A:K.45, A:K.45 Salt bridges: A:H.42, A:K.45, A:K.45 Metal complexes: A:H.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lukat, P. et al., Crystal packing of the c(6)-type cytochrome OmcF from Geobacter sulfurreducens is mediated by an N-terminal Strep-tag II. ACTA CRYSTALLOGR.,SECT.D (2008)

Release Date

2008-09-02

Peptides

Cytochrome c family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome c family protein