SMTL ID : 3drp.1

HIV reverse transcriptase in complex with inhibitor R8e

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-oligomer

Ligands

1 x R8E: 3-{5-[(6-AMINO-1H-PYRAZOLO[3,4-B]PYRIDIN-3-YL)METHOXY]-2-CHLOROPHENOXY}-5-CHLOROBENZONITRILE(Non-covalent)

R8E.1: 18 residues within 4Å: Chain A: P.98, L.103, K.104, K.105, K.106, V.109, V.182, Y.184, Y.191, V.192, G.193, P.228, F.230, W.232, L.237, H.238, P.239, Y.321 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.103, A:V.182, A:Y.184, A:Y.184, A:F.230, A:L.237, A:L.237 Hydrogen bonds: A:K.106, A:L.237 Water bridges: A:V.109 pi-Stacking: A:Y.191, A:W.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tucker, T.J. et al., Discovery of 3-{5-[(6-Amino-1H-pyrazolo[3,4-b]pyridine-3-yl)methoxy]-2-chlorophenoxy}-5-chlorobenzonitrile (MK-4965): A Potent, Orally Bioavailable HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitor with Improved Potency against Key Mutant Viruses. J.Med.Chem. (2008)

Release Date

2008-10-14

Peptides

Reverse transcriptase/ribonuclease H: A
p51 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

p51 RT

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