SMTL ID : 3dt3.1

Human Estrogen receptor alpha LBD with GW368

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x 369: 5-(4-hydroxyphenoxy)-6-(3-hydroxyphenyl)-7-methylnaphthalen-2-ol(Non-covalent)

369.1: 17 residues within 4Å: Chain A: M.47, L.50, T.51, A.54, E.57, W.87, L.91, M.92, L.95, R.98, F.108, M.125, I.128, L.132, G.225, H.228, L.229 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.54, A:W.87, A:L.91, A:L.95, A:L.132, A:L.229 Hydrogen bonds: A:L.91, A:R.98, A:H.228 Water bridges: A:R.98 pi-Stacking: A:F.108, A:F.108 369.2: 15 residues within 4Å: Chain B: L.50, T.51, A.54, E.57, W.87, L.91, M.92, L.95, R.98, F.108, M.125, L.132, G.225, H.228, L.229 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.50, B:A.54, B:W.87, B:L.91, B:L.95, B:L.132, B:L.229 Hydrogen bonds: B:R.98, B:H.228 Water bridges: B:E.57, B:R.98 pi-Stacking: B:F.108, B:F.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fang, J. et al., Synthesis of 3-alkyl naphthalenes as novel estrogen receptor ligands. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-09-09

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Estrogen receptor

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