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SMTL ID : 3dwi.1
Crystal structure of Mycobacterium tuberculosis CysM, the cysteine synthase B
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.81 Å
Oligo State
homo-dimer
Ligands
3 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.1:
4 residues within 4Å:
Chain A:
Y.240
,
S.241
,
D.246
,
H.271
2
PLIP interactions
:
2 interactions with chain A
Hydrogen bonds:
A:S.241
Salt bridges:
A:H.271
SO4.3:
6 residues within 4Å:
Chain B:
T.78
,
S.79
,
G.80
,
R.109
,
Q.151
,
Y.152
7
PLIP interactions
:
7 interactions with chain B
Hydrogen bonds:
B:T.78
,
B:S.79
,
B:G.80
,
B:R.109
,
B:Q.151
,
B:Y.152
Water bridges:
B:A.218
SO4.4:
1 residues within 4Å:
Chain B:
R.286
2
PLIP interactions
:
2 interactions with chain B
Water bridges:
B:R.286
Salt bridges:
B:R.286
2 x
PLP
:
PYRIDOXAL-5'-PHOSPHATE
(Covalent)
PLP.2:
13 residues within 4Å:
Chain A:
I.50
,
K.51
,
N.81
,
G.182
,
L.183
,
G.184
,
T.185
,
T.186
,
G.187
,
T.188
,
S.265
,
A.294
,
D.295
16
PLIP interactions
:
16 interactions with chain A
Hydrophobic interactions:
A:I.50
,
A:K.51
,
A:A.294
,
A:D.295
Hydrogen bonds:
A:N.81
,
A:G.184
,
A:T.185
,
A:T.186
,
A:G.187
,
A:T.188
,
A:T.188
,
A:T.188
,
A:S.265
Water bridges:
A:N.157
,
A:N.157
Salt bridges:
A:K.51
PLP.5:
14 residues within 4Å:
Chain B:
K.51
,
N.81
,
G.182
,
G.184
,
T.185
,
T.186
,
G.187
,
T.188
,
A.218
,
L.219
,
S.265
,
A.294
,
D.295
,
Y.300
16
PLIP interactions
:
16 interactions with chain B
Hydrophobic interactions:
B:K.51
,
B:A.218
,
B:L.219
,
B:A.294
Hydrogen bonds:
B:N.81
,
B:G.182
,
B:G.184
,
B:T.185
,
B:T.186
,
B:G.187
,
B:T.188
,
B:T.188
,
B:S.265
Water bridges:
B:T.185
,
B:T.185
Salt bridges:
B:K.51
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Jurgenson, C.T. et al., Crystal structure of a sulfur carrier protein complex found in the cysteine biosynthetic pathway of Mycobacterium tuberculosis. Biochemistry (2008)
Release Date
2008-09-23
Peptides
Cysteine synthase B:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Cysteine synthase B
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
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Extreme