SMTL ID : 3dws.1

Leishmania major Coproporphyrinogen III Oxidase with bound ligand

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 7 residues within 4Å: Chain A: V.103, H.115, R.189, Y.249, N.253, S.276 Ligands: FIC.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.103 Hydrogen bonds: A:N.253 Water bridges: A:H.115, A:D.257 Salt bridges: A:H.115, A:R.189 ACT.3: 7 residues within 4Å: Chain B: V.103, H.115, R.189, Y.249, N.253, S.276 Ligands: FIC.5 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:V.103 Hydrogen bonds: B:Y.249, B:N.253 Salt bridges: B:H.115, B:R.189 ACT.4: 4 residues within 4Å: Chain B: P.130, V.131, W.132, N.200 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:W.132

2 x FIC: 5-fluoroindole-2-carboxylic acid(Non-covalent)

FIC.2: 6 residues within 4Å: Chain A: S.101, H.115, N.117, R.119, G.259 Ligands: ACT.1 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.119 pi-Cation interactions: A:R.119 FIC.5: 6 residues within 4Å: Chain B: S.101, H.115, N.117, R.119, G.259 Ligands: ACT.3 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.119 pi-Cation interactions: B:R.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

merritt, E.A. et al., Leishmania major Coproporphyrinogen III Oxidase with bound ligand. To be Published

Release Date

2008-09-09

Peptides

Coproporphyrinogen III oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coproporphyrinogen III oxidase

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