SMTL ID : 3dxb.5 (4 other biounits)

Structure of the UHM domain of Puf60 fused to thioredoxin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-octamer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: H.16, W.38 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain E: W.199, K.204 Ligand excluded by PLIP CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain H: R.214 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain E: V.128, R.130, E.208, V.209, Y.210, D.211, A.222 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:R.130, E:E.208, E:D.211 Water bridges: E:R.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Corsini, L. et al., Dimerization and Protein Binding Specificity of the U2AF Homology Motif of the Splicing Factor Puf60. J.Biol.Chem. (2009)

Release Date

2008-10-28

Peptides

thioredoxin N-terminally fused to Puf60(UHM): ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

thioredoxin N-terminally fused to Puf60(UHM)

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