- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
EPE.2: 8 residues within 4Å:- Chain A: A.37, G.38, I.85
- Chain B: R.12, Y.63
- Ligands: EDO.8, FMN.10, EDO.12
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.38
EPE.9: 7 residues within 4Å:- Chain A: R.12, Y.63
- Chain B: A.37, G.38, I.85
- Ligands: FMN.1, EDO.4
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:G.38
- Water bridges: A:R.12, A:R.12
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 6 residues within 4Å:- Chain A: L.48, N.53, K.56, L.57, M.129, F.130
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.53
- Water bridges: A:K.56
EDO.4: 7 residues within 4Å:- Chain A: Y.63, G.115, R.122
- Chain B: I.85, M.88
- Ligands: FMN.1, EPE.9
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.115, A:R.122, A:R.122
EDO.5: 5 residues within 4Å:- Chain A: I.155, R.157
- Chain B: N.39
- Ligands: FMN.1, EDO.6
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.157
- Water bridges: B:N.39
EDO.6: 5 residues within 4Å:- Chain A: S.10, R.12, R.157
- Ligands: FMN.1, EDO.5
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.12, A:R.157
- Water bridges: A:S.10, A:R.12
EDO.7: 7 residues within 4Å:- Chain A: I.4, E.103, Y.106
- Chain B: M.2, D.3, I.4, I.5
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:I.4, B:I.5, A:E.103
- Water bridges: B:N.6
EDO.8: 5 residues within 4Å:- Chain A: G.38, N.39
- Chain B: R.12
- Ligands: EPE.2, FMN.10
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Water bridges: A:G.38, A:G.38, B:R.12
- Hydrogen bonds: B:R.12
EDO.11: 4 residues within 4Å:- Chain B: H.164, I.165, K.167, Y.168
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:I.163, B:I.165
EDO.12: 7 residues within 4Å:- Chain A: I.85, M.88
- Chain B: Y.63, G.115, R.122
- Ligands: EPE.2, FMN.10
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.115, B:R.122, B:R.122
EDO.13: 5 residues within 4Å:- Chain B: N.53, K.56, L.57, M.129, F.130
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.53
- Water bridges: B:N.53
EDO.14: 5 residues within 4Å:- Chain B: S.61, K.62, Y.63, I.119, R.122
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.61, B:K.62, B:R.122
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of Putative NADH Oxidase (NP_348178.1) from CLOSTRIDIUM ACETOBUTYLICUM at 1.40 A resolution. To be published
- Release Date
- 2008-08-12
- Peptides
- Putative NADH Oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of Putative NADH Oxidase (NP_348178.1) from CLOSTRIDIUM ACETOBUTYLICUM at 1.40 A resolution. To be published
- Release Date
- 2008-08-12
- Peptides
- Putative NADH Oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B