SMTL ID : 3e16.1

X-ray structure of human prostasin in complex with Benzoxazole warhead peptidomimic, lysine in P3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x B4C: benzyl [(1S)-5-amino-1-{[(1S)-1-({(1S)-5-amino-1-[(S)-1,3-benzoxazol-2-yl(hydroxy)methyl]pentyl}carbamoyl)-3-phenylpropyl]carbamoyl}pentyl]carbamate(Covalent)

B4C.2: 18 residues within 4Å: Chain A: H.41, E.85, G.86, D.90, P.170, H.171, F.172, A.189, C.190, Q.191, G.192, D.193, S.194, V.212, S.213, W.214, G.215, D.216 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:H.41, A:E.85, A:E.85, A:A.189, A:W.214, A:W.214 Hydrogen bonds: A:C.190, A:Q.191, A:G.192, A:D.193, A:S.194, A:S.213, A:G.215, A:G.215 Water bridges: A:D.188, A:D.188, A:D.216, A:A.217 pi-Stacking: A:H.41, A:W.214

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 4 residues within 4Å: Chain A: Q.11, W.12, W.14, W.206 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:W.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tully, D.C. et al., Discovery of inhibitors of the channel-activating protease prostasin (CAP1/PRSS8) utilizing structure-based design. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-09-09

Peptides

Prostasin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Prostasin

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