SMTL ID : 3e28.1 (4 other biounits)

H. influenzae beta-carbonic anhydrase, variant Y181F

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.42, D.44, H.98, C.101, G.102 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:D.44, A:H.98, A:C.101 ZN.6: 4 residues within 4Å: Chain B: C.42, D.44, H.98, C.101 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.42, B:D.44, B:H.98, B:C.101 ZN.9: 5 residues within 4Å: Chain C: C.42, D.44, H.98, C.101, G.102 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.42, C:D.44, C:H.98, C:C.101 ZN.14: 4 residues within 4Å: Chain D: C.42, D.44, H.98, C.101 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.42, D:D.44, D:H.98, D:C.101

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: L.121, R.124, F.128 Chain B: R.160, R.198 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Salt bridges: A:R.124, B:R.160, B:K.165, B:R.198 SO4.3: 5 residues within 4Å: Chain A: R.160, K.165, R.198 Chain B: L.121, R.124 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Salt bridges: A:R.160, A:K.165, A:R.198, B:R.124 SO4.4: 8 residues within 4Å: Chain A: P.48, E.50, R.64 Chain C: P.48, A.49, E.50, R.64 Ligands: SO4.12 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:A.49, C:E.50 Salt bridges: C:R.64, A:R.64 SO4.5: 7 residues within 4Å: Chain A: S.45, R.46, V.47, H.98, T.99, F.181, V.183 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.46, A:V.47, A:T.99 Salt bridges: A:H.98 SO4.7: 10 residues within 4Å: Chain B: P.48, E.50, V.62, R.64 Chain D: P.48, A.49, E.50, V.62, R.64 Ligands: SO4.15 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:A.49 Salt bridges: D:R.64, B:R.64 SO4.8: 7 residues within 4Å: Chain B: S.45, R.46, V.47, H.98, T.99, F.181, V.183 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.46, B:V.47, B:V.183 Salt bridges: B:R.46, B:H.98 SO4.10: 5 residues within 4Å: Chain C: L.121, R.124, F.128 Chain D: R.160, R.198 4 PLIP interactions: 3 interactions with chain D, 1 interactions with chain C Salt bridges: D:R.160, D:K.165, D:R.198, C:R.124 SO4.11: 5 residues within 4Å: Chain C: R.160, K.165, R.198 Chain D: L.121, R.124 4 PLIP interactions: 1 interactions with chain D, 3 interactions with chain C Salt bridges: D:R.124, C:R.160, C:K.165, C:R.198 SO4.12: 8 residues within 4Å: Chain A: P.48, A.49, E.50, R.64 Chain C: P.48, E.50, R.64 Ligands: SO4.4 4 PLIP interactions: 1 interactions with chain C, 3 interactions with chain A Salt bridges: C:R.64, A:R.64 Hydrogen bonds: A:A.49, A:E.50 SO4.13: 7 residues within 4Å: Chain C: S.45, R.46, V.47, H.98, T.99, F.181, V.183 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.46, C:V.47, C:T.99 Salt bridges: C:H.98 SO4.15: 10 residues within 4Å: Chain B: P.48, A.49, E.50, V.62, R.64 Chain D: P.48, E.50, V.62, R.64 Ligands: SO4.7 3 PLIP interactions: 1 interactions with chain D, 2 interactions with chain B Salt bridges: D:R.64, B:R.64 Hydrogen bonds: B:A.49 SO4.16: 7 residues within 4Å: Chain D: S.45, R.46, V.47, H.98, T.99, F.181, V.183 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:R.46, D:V.47, D:V.183 Salt bridges: D:R.46, D:H.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rowlett, R.S. et al., Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase. Biochemistry (2009)

Release Date

2009-06-02

Peptides

Carbonic anhydrase 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Carbonic anhydrase 2

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