SMTL ID : 3e3r.1 (1 other biounit)

Crystal structure and biochemical characterization of recombinant human calcyphosine delineates a novel EF-hand-containing protein family

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

9 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.1: 5 residues within 4Å: Chain A: D.83, N.85, S.87, T.89, E.94 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.83, A:S.87, A:T.89, A:E.94, A:E.94 CA.2: 4 residues within 4Å: Chain A: D.162, D.167, Q.169, E.174 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.162, A:D.167, A:Q.169, A:E.174, A:E.174 CA.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.4: 6 residues within 4Å: Chain A: D.47, D.49, S.51, S.53, D.55, E.58 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.47, A:D.49, A:S.51, A:S.53, A:E.58 CA.5: 5 residues within 4Å: Chain A: D.119, S.121, D.123, V.125, D.130 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.119, A:S.121, A:D.123, A:D.130, H2O.1 CA.6: 5 residues within 4Å: Chain B: D.83, N.85, S.87, T.89, E.94 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.83, B:S.87, B:T.89, B:E.94, B:E.94 CA.7: 4 residues within 4Å: Chain B: D.162, D.167, Q.169, E.174 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.162, B:D.167, B:Q.169, B:E.174, B:E.174 CA.8: 6 residues within 4Å: Chain B: D.119, S.121, G.122, D.123, V.125, D.130 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.119, B:S.121, B:D.123, B:V.125, B:D.130 CA.9: 6 residues within 4Å: Chain B: D.47, D.49, S.51, S.53, D.55, E.58 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.47, B:D.49, B:S.51, B:S.53, B:E.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, H. et al., Crystal-structure and biochemical characterization of recombinant human calcyphosine delineates a novel EF-hand-containing protein family. J.Mol.Biol. (2008)

Release Date

2008-08-26

Peptides

Calcyphosin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Calcyphosin

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