SMTL ID : 3e8z.1

X-ray structure of rat arginase I-N130A mutant: the unliganded complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.101, D.124, D.128, D.232 Ligands: MN.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.101, A:D.124, A:D.128, A:D.232, H2O.4 MN.2: 5 residues within 4Å: Chain A: D.124, H.126, D.232, D.234 Ligands: MN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.124, A:H.126, A:D.232, A:D.234, H2O.4 MN.3: 5 residues within 4Å: Chain B: H.101, D.124, D.128, D.232 Ligands: MN.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.101, B:D.124, B:D.128, B:D.232, H2O.9 MN.4: 5 residues within 4Å: Chain B: D.124, H.126, D.232, D.234 Ligands: MN.3 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.124, B:H.126, B:D.232, B:D.234, H2O.9 MN.5: 5 residues within 4Å: Chain C: H.101, D.124, D.128, D.232 Ligands: MN.6 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.101, C:D.124, C:D.128, C:D.232, H2O.12 MN.6: 5 residues within 4Å: Chain C: D.124, H.126, D.232, D.234 Ligands: MN.5 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.124, C:H.126, C:D.232, C:D.234, H2O.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shishova, E.Y. et al., Probing the specificity determinants of amino acid recognition by arginase. Biochemistry (2009)

Release Date

2008-12-02

Peptides

Arginase-1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Arginase-1