SMTL ID : 3ecr.2 (1 other biounit)

Structure of human porphobilinogen deaminase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

monomer

Ligands

1 x DPM: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid(Non-covalent)

DPM.1: 18 residues within 4Å: Chain A: Q.37, I.74, G.75, S.99, K.101, D.102, S.149, S.150, R.152, R.153, R.176, L.191, A.192, R.198, A.217, Q.220, G.221, C.264 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.74, A:A.192 Hydrogen bonds: A:Q.37, A:D.102, A:D.102, A:S.149, A:S.150, A:A.192, A:R.198, A:G.221 Water bridges: A:R.152 Salt bridges: A:K.101, A:K.101, A:K.101, A:R.152, A:R.153, A:R.153, A:R.153, A:R.176 pi-Cation interactions: A:K.101, A:K.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, G. et al., Structural insight into acute intermittent porphyria. Faseb J. (2009)

Release Date

2008-09-30

Peptides

Porphobilinogen deaminase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Porphobilinogen deaminase

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