SMTL ID : 3ed4.1 (1 other biounit)

Crystal structure of putative arylsulfatase from escherichia coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: Y.40, T.67, D.68, R.340, R.447 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.40, A:Y.40, A:D.68, A:R.340, A:R.340, A:R.447 GOL.6: 6 residues within 4Å: Chain B: P.360, R.400, L.404, R.423, D.424, G.425 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.423, B:D.424, B:D.424, B:G.425 Water bridges: B:G.425 GOL.9: 4 residues within 4Å: Chain B: K.402, K.470, Y.471, D.474 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.470, B:K.470, B:K.470

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: E.311 Chain B: E.311 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:D.415, B:D.415, A:R.313, A:D.415 Water bridges: B:R.313, B:R.313 NA.3: 6 residues within 4Å: Chain A: D.36, D.37, S.76, D.304, N.305 Ligands: SO4.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.37, A:D.37, A:N.305 NA.8: 6 residues within 4Å: Chain B: D.36, D.37, S.76, D.304, N.305 Ligands: SO4.7 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.37, B:D.304, B:N.305

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 9 residues within 4Å: Chain A: D.37, L.75, S.76, K.129, H.131, G.158, H.227, K.331 Ligands: NA.3 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:D.37, A:S.76, A:S.76 Water bridges: A:S.77, A:S.77, A:K.331, A:K.331 Salt bridges: A:K.129, A:H.131, A:H.227, A:K.331 SO4.7: 8 residues within 4Å: Chain B: L.75, S.76, K.129, H.131, G.158, H.227, K.331 Ligands: NA.8 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.76, B:S.76, B:S.76 Salt bridges: B:K.129, B:H.131, B:H.227, B:K.331

2 x UNL: UNKNOWN LIGAND

UNL.5: 4 residues within 4Å: Chain A: H.48, Q.49, E.323 Chain B: W.264 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.47 UNL.10: 5 residues within 4Å: Chain A: W.264, R.310 Chain B: H.48, Q.49, E.323 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.49, B:Q.49, B:E.323 Water bridges: A:R.310

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., Crystal Structure of Arylsulfatase from Escherichia Coli. To be Published

Release Date

2008-09-16

Peptides

ARYLSULFATASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ARYLSULFATASE

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