SMTL ID : 3edo.1 (1 other biounit)

Crystal structure of Flavoprotein in Complex with FMN (YP_193882.1) from Lactobacillus acidophilus NCFM at 1.20 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 19 residues within 4Å: Chain A: S.12, W.13, S.14, G.15, E.16, T.17, S.51, P.85, V.86, W.87, S.88, G.89, T.114, S.115, A.116, G.117, T.118, N.119 Ligands: EDO.4 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:W.13, A:W.87 Hydrogen bonds: A:W.13, A:S.14, A:S.14, A:G.15, A:E.16, A:T.17, A:T.17, A:V.86, A:V.86, A:S.88, A:G.89, A:T.114, A:T.114, A:A.116, A:T.118, A:T.118, A:N.119 Water bridges: A:S.14, A:S.115, A:T.118, A:T.118

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: G.1, M.2, S.150, K.151 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.1, A:K.151, A:K.151 Water bridges: A:K.151 EDO.3: 2 residues within 4Å: Chain A: E.27, D.147 No protein-ligand interaction detected (PLIP) EDO.4: 4 residues within 4Å: Chain A: S.51, L.55, S.88 Ligands: FMN.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.88 EDO.5: 2 residues within 4Å: Chain A: S.115, R.141 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.115, A:R.141 Water bridges: A:S.115 EDO.6: 2 residues within 4Å: Chain A: I.58, Y.90 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.90, A:Y.90 EDO.7: 4 residues within 4Å: Chain A: N.75, Y.77, D.78, G.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.77 Water bridges: A:D.78, A:D.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Flavoprotein in Complex with FMN (YP_193882.1) from Lactobacillus acidophilus NCFM at 1.20 A resolution. To be published

Release Date

2008-09-30

Peptides

Putative trp repressor binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative trp repressor binding protein

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