SMTL ID : 3edz.1 (1 other biounit)

Crystal structure of catalytic domain of TACE with hydroxamate inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.191, H.195, H.201 Ligands: INN.2 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions, 1 Ligand-Water interactions Metal complexes: A:H.191, A:H.195, A:H.201, INN.2, H2O.7

1 x INN: N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide(Non-covalent)

INN.2: 17 residues within 4Å: Chain A: M.131, G.132, T.133, L.134, G.135, N.175, Y.176, V.188, H.191, E.192, H.195, H.201, Y.222, P.223, I.224, A.225 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.188, A:H.191, A:I.224 Hydrogen bonds: A:G.132, A:L.134, A:G.135, A:P.223, A:A.225

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.3: 8 residues within 4Å: Chain A: G.139, G.140, S.141, S.146, H.147, G.148, K.153, K.251 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:G.140, A:G.148 Water bridges: A:S.141, A:S.141, A:S.141, A:S.146, A:S.146, A:H.147, A:G.148, A:K.153 Salt bridges: A:H.147, A:K.153, A:K.153, A:K.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mazzola, R.D. et al., Discovery of novel hydroxamates as highly potent tumor necrosis factor-alpha converting enzyme inhibitors. Part II: optimization of the S3' pocket. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-09-23

Peptides

ADAM 17: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADAM 17

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