SMTL ID : 3ee2.1

Structure of human prostaglandin D-synthase (hGSTS1-1) in complex with nocodazole

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

homo-dimer

Ligands

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 13 residues within 4Å: Chain A: Y.8, F.9, R.14, W.39, K.43, G.49, K.50, I.51, P.52, Q.63, S.64 Chain B: D.97 Ligands: NZO.2 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:K.50 Hydrogen bonds: A:I.51, A:I.51, A:Q.63, A:S.64, B:D.97 Water bridges: A:Q.63, A:L.65 Salt bridges: A:R.14, A:K.43, A:K.50

1 x NZO: nocodazole(Non-covalent)

NZO.2: 11 residues within 4Å: Chain A: Y.8, G.13, R.14, D.96, M.99, W.104, Y.152, C.156, T.159, L.199 Ligands: GSH.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.14, A:M.99, A:W.104 Hydrogen bonds: A:T.159

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain B: D.96 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weber, J.E. et al., Identification and characterisation of new inhibitors for the human hematopoietic prostaglandin D(2) synthase. Eur.J.Med.Chem. (2010)

Release Date

2008-09-16

Peptides

Glutathione-requiring prostaglandin D synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glutathione-requiring prostaglandin D synthase