SMTL ID : 3ej2.1 (2 other biounits)

Crystal structure of inorganic pyrophosphatase from burkholderia pseudomallei with bound 5-amino-1-(4-chlorophenyl)-1h-pyrazole-4-carbonitrile, H32 crystal form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

homo-hexamer

Ligands

6 x 928: 5-amino-1-(4-chlorophenyl)-1H-pyrazole-4-carbonitrile(Non-covalent)

928.1: 10 residues within 4Å: Chain A: I.96, L.142, P.149, Y.151 Chain F: I.96, T.97, P.98, M.138, T.139 Ligands: 928.6 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.149 928.2: 10 residues within 4Å: Chain B: I.96, L.142, P.149, Y.151 Chain E: I.96, T.97, P.98, M.138, T.139 Ligands: 928.5 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:P.149 928.3: 10 residues within 4Å: Chain C: I.96, L.142, P.149, Y.151 Chain D: I.96, T.97, P.98, M.138, T.139 Ligands: 928.4 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:P.149 928.4: 10 residues within 4Å: Chain C: I.96, T.97, P.98, M.138, T.139 Chain D: I.96, L.142, P.149, Y.151 Ligands: 928.3 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:P.149 Hydrogen bonds: D:Y.151 928.5: 10 residues within 4Å: Chain B: I.96, T.97, P.98, M.138, T.139 Chain E: I.96, L.142, P.149, Y.151 Ligands: 928.2 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:P.149 Hydrogen bonds: E:Y.151 928.6: 10 residues within 4Å: Chain A: I.96, T.97, P.98, M.138, T.139 Chain F: I.96, L.142, P.149, Y.151 Ligands: 928.1 2 PLIP interactions: 2 interactions with chain F Hydrophobic interactions: F:P.149 Hydrogen bonds: F:Y.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One (2013)

Release Date

2008-09-30

Peptides

Inorganic pyrophosphatase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Inorganic pyrophosphatase

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