SMTL ID : 3ek1.1 (1 other biounit)

Crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.202, A.204, D.205, A.235 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.205, A:D.205 Water bridges: A:W.178, A:R.202, A:R.202, A:L.206 Salt bridges: A:R.202 SO4.3: 4 residues within 4Å: Chain B: R.202, A.204, D.205, A.235 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.205 Water bridges: B:R.202, B:L.206, B:A.235 Salt bridges: B:R.202 SO4.5: 4 residues within 4Å: Chain C: R.202, A.204, D.205, A.235 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:D.205, C:D.205 Water bridges: C:R.202, C:R.202, C:R.202, C:L.206 Salt bridges: C:R.202 SO4.7: 3 residues within 4Å: Chain D: R.202, A.204, D.205 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:D.205 Water bridges: D:D.205, D:L.206, D:A.235 Salt bridges: D:R.202

4 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 8 residues within 4Å: Chain A: Y.133, N.179, F.180, R.187, R.305, C.311, V.312, S.466 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.179, A:R.305, A:C.311, A:V.312, A:S.466 Water bridges: A:R.187, A:R.187, A:S.466 Salt bridges: A:R.187 MES.4: 11 residues within 4Å: Chain B: Y.133, N.179, F.180, M.184, R.187, E.277, R.305, T.310, C.311, V.312, S.466 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.179, B:R.305, B:T.310, B:C.311, B:V.312, B:S.466 Water bridges: B:R.187, B:R.187 Salt bridges: B:R.187 MES.6: 7 residues within 4Å: Chain C: Y.133, F.180, M.184, R.187, E.277, V.312, S.466 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:V.312, C:S.466 Water bridges: C:N.179, C:R.187, C:R.187, C:C.311 Salt bridges: C:R.187 MES.8: 10 residues within 4Å: Chain D: Y.133, F.180, M.184, R.187, E.277, T.310, C.311, V.312, S.466, F.472 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:T.310, D:C.311, D:V.312, D:S.466 Salt bridges: D:R.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308. To be Published

Release Date

2008-09-30

Peptides

Aldehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Aldehyde dehydrogenase

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