- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x AU: GOLD ION(Non-covalent)
- 48 x CA: CALCIUM ION(Non-covalent)
CA.5: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain I: D.132, E.135
- Chain Q: D.132, E.135
- Ligands: CA.53, CA.101
5 PLIP interactions:2 interactions with chain I, 2 interactions with chain Q, 1 interactions with chain A- Metal complexes: I:D.132, I:E.135, Q:D.132, Q:E.135, A:E.135
CA.6: 2 residues within 4Å:- Chain A: Q.87
- Chain N: D.85
2 PLIP interactions:2 interactions with chain N- Metal complexes: N:D.85, N:D.85
CA.11: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain K: D.132, E.135
- Chain T: D.132, E.135
- Ligands: CA.65, CA.119
5 PLIP interactions:2 interactions with chain B, 1 interactions with chain T, 2 interactions with chain K- Metal complexes: B:D.132, B:E.135, T:E.135, K:D.132, K:E.135
CA.12: 2 residues within 4Å:- Chain B: Q.87
- Chain P: D.85
2 PLIP interactions:2 interactions with chain P- Metal complexes: P:D.85, P:D.85
CA.17: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain L: D.132, E.135
- Chain R: D.132, E.135
- Ligands: CA.71, CA.107
5 PLIP interactions:1 interactions with chain C, 2 interactions with chain L, 2 interactions with chain R- Metal complexes: C:E.135, L:D.132, L:E.135, R:D.132, R:E.135
CA.18: 2 residues within 4Å:- Chain C: Q.87
- Chain M: D.85
2 PLIP interactions:2 interactions with chain M- Metal complexes: M:D.85, M:D.85
CA.23: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain J: D.132, E.135
- Chain S: D.132, E.135
- Ligands: CA.59, CA.113
5 PLIP interactions:2 interactions with chain D, 2 interactions with chain J, 1 interactions with chain S- Metal complexes: D:D.132, D:E.135, J:D.132, J:E.135, S:E.135
CA.24: 2 residues within 4Å:- Chain D: Q.87
- Chain O: D.85
2 PLIP interactions:2 interactions with chain O- Metal complexes: O:D.85, O:D.85
CA.29: 8 residues within 4Å:- Chain E: D.132, E.135
- Chain M: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.77, CA.125
5 PLIP interactions:2 interactions with chain M, 2 interactions with chain U, 1 interactions with chain E- Metal complexes: M:D.132, M:E.135, U:D.132, U:E.135, E:E.135
CA.30: 2 residues within 4Å:- Chain E: Q.87
- Chain Q: D.85
2 PLIP interactions:2 interactions with chain Q- Metal complexes: Q:D.85, Q:D.85
CA.35: 8 residues within 4Å:- Chain F: D.132, E.135
- Chain P: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.95, CA.137
5 PLIP interactions:2 interactions with chain W, 2 interactions with chain F, 1 interactions with chain P- Metal complexes: W:D.132, W:E.135, F:D.132, F:E.135, P:E.135
CA.36: 2 residues within 4Å:- Chain F: Q.87
- Chain S: D.85
2 PLIP interactions:2 interactions with chain S- Metal complexes: S:D.85, S:D.85
CA.41: 8 residues within 4Å:- Chain G: D.132, E.135
- Chain N: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.83, CA.143
5 PLIP interactions:2 interactions with chain X, 2 interactions with chain N, 1 interactions with chain G- Metal complexes: X:D.132, X:E.135, N:D.132, N:E.135, G:E.135
CA.42: 2 residues within 4Å:- Chain G: Q.87
- Chain R: D.85
2 PLIP interactions:2 interactions with chain R- Metal complexes: R:D.85, R:D.85
CA.47: 8 residues within 4Å:- Chain H: D.132, E.135
- Chain O: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.89, CA.131
5 PLIP interactions:2 interactions with chain H, 2 interactions with chain V, 1 interactions with chain O- Metal complexes: H:D.132, H:E.135, V:D.132, V:E.135, O:E.135
CA.48: 2 residues within 4Å:- Chain H: Q.87
- Chain T: D.85
2 PLIP interactions:2 interactions with chain T- Metal complexes: T:D.85, T:D.85
CA.53: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain I: D.132, E.135
- Chain Q: D.132, E.135
- Ligands: CA.5, CA.101
5 PLIP interactions:2 interactions with chain I, 1 interactions with chain A, 2 interactions with chain Q- Metal complexes: I:D.132, I:E.135, A:E.135, Q:D.132, Q:E.135
CA.54: 2 residues within 4Å:- Chain I: Q.87
- Chain W: D.85
2 PLIP interactions:2 interactions with chain W- Metal complexes: W:D.85, W:D.85
CA.59: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain J: D.132, E.135
- Chain S: D.132, E.135
- Ligands: CA.23, CA.113
5 PLIP interactions:2 interactions with chain J, 1 interactions with chain S, 2 interactions with chain D- Metal complexes: J:D.132, J:E.135, S:E.135, D:D.132, D:E.135
CA.60: 2 residues within 4Å:- Chain J: Q.87
- Chain U: D.85
2 PLIP interactions:2 interactions with chain U- Metal complexes: U:D.85, U:D.85
CA.65: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain K: D.132, E.135
- Chain T: D.132, E.135
- Ligands: CA.11, CA.119
5 PLIP interactions:2 interactions with chain K, 2 interactions with chain B, 1 interactions with chain T- Metal complexes: K:D.132, K:E.135, B:D.132, B:E.135, T:E.135
CA.66: 2 residues within 4Å:- Chain K: Q.87
- Chain X: D.85
2 PLIP interactions:2 interactions with chain X- Metal complexes: X:D.85, X:D.85
CA.71: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain L: D.132, E.135
- Chain R: D.132, E.135
- Ligands: CA.17, CA.107
5 PLIP interactions:1 interactions with chain C, 2 interactions with chain R, 2 interactions with chain L- Metal complexes: C:E.135, R:D.132, R:E.135, L:D.132, L:E.135
CA.72: 2 residues within 4Å:- Chain L: Q.87
- Chain V: D.85
2 PLIP interactions:2 interactions with chain V- Metal complexes: V:D.85, V:D.85
CA.77: 8 residues within 4Å:- Chain E: D.132, E.135
- Chain M: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.29, CA.125
5 PLIP interactions:1 interactions with chain E, 2 interactions with chain U, 2 interactions with chain M- Metal complexes: E:E.135, U:D.132, U:E.135, M:D.132, M:E.135
CA.78: 2 residues within 4Å:- Chain C: D.85
- Chain M: Q.87
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:D.85, C:D.85
CA.83: 8 residues within 4Å:- Chain G: D.132, E.135
- Chain N: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.41, CA.143
5 PLIP interactions:2 interactions with chain X, 2 interactions with chain N, 1 interactions with chain G- Metal complexes: X:D.132, X:E.135, N:D.132, N:E.135, G:E.135
CA.84: 2 residues within 4Å:- Chain A: D.85
- Chain N: Q.87
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.85, A:D.85
CA.89: 8 residues within 4Å:- Chain H: D.132, E.135
- Chain O: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.47, CA.131
5 PLIP interactions:2 interactions with chain H, 2 interactions with chain V, 1 interactions with chain O- Metal complexes: H:D.132, H:E.135, V:D.132, V:E.135, O:E.135
CA.90: 2 residues within 4Å:- Chain D: D.85
- Chain O: Q.87
2 PLIP interactions:2 interactions with chain D- Metal complexes: D:D.85, D:D.85
CA.95: 8 residues within 4Å:- Chain F: D.132, E.135
- Chain P: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.35, CA.137
5 PLIP interactions:2 interactions with chain F, 1 interactions with chain P, 2 interactions with chain W- Metal complexes: F:D.132, F:E.135, P:E.135, W:D.132, W:E.135
CA.96: 2 residues within 4Å:- Chain B: D.85
- Chain P: Q.87
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.85, B:D.85
CA.101: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain I: D.132, E.135
- Chain Q: D.132, E.135
- Ligands: CA.5, CA.53
5 PLIP interactions:2 interactions with chain Q, 1 interactions with chain A, 2 interactions with chain I- Metal complexes: Q:D.132, Q:E.135, A:E.135, I:D.132, I:E.135
CA.102: 2 residues within 4Å:- Chain E: D.85
- Chain Q: Q.87
2 PLIP interactions:2 interactions with chain E- Metal complexes: E:D.85, E:D.85
CA.107: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain L: D.132, E.135
- Chain R: D.132, E.135
- Ligands: CA.17, CA.71
5 PLIP interactions:2 interactions with chain L, 2 interactions with chain R, 1 interactions with chain C- Metal complexes: L:D.132, L:E.135, R:D.132, R:E.135, C:E.135
CA.108: 2 residues within 4Å:- Chain G: D.85
- Chain R: Q.87
2 PLIP interactions:2 interactions with chain G- Metal complexes: G:D.85, G:D.85
CA.113: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain J: D.132, E.135
- Chain S: D.132, E.135
- Ligands: CA.23, CA.59
5 PLIP interactions:2 interactions with chain J, 1 interactions with chain S, 2 interactions with chain D- Metal complexes: J:D.132, J:E.135, S:E.135, D:D.132, D:E.135
CA.114: 2 residues within 4Å:- Chain F: D.85
- Chain S: Q.87
2 PLIP interactions:2 interactions with chain F- Metal complexes: F:D.85, F:D.85
CA.119: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain K: D.132, E.135
- Chain T: D.132, E.135
- Ligands: CA.11, CA.65
5 PLIP interactions:2 interactions with chain B, 2 interactions with chain K, 1 interactions with chain T- Metal complexes: B:D.132, B:E.135, K:D.132, K:E.135, T:E.135
CA.120: 2 residues within 4Å:- Chain H: D.85
- Chain T: Q.87
2 PLIP interactions:2 interactions with chain H- Metal complexes: H:D.85, H:D.85
CA.125: 8 residues within 4Å:- Chain E: D.132, E.135
- Chain M: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.29, CA.77
5 PLIP interactions:2 interactions with chain M, 2 interactions with chain U, 1 interactions with chain E- Metal complexes: M:D.132, M:E.135, U:D.132, U:E.135, E:E.135
CA.126: 2 residues within 4Å:- Chain J: D.85
- Chain U: Q.87
2 PLIP interactions:2 interactions with chain J- Metal complexes: J:D.85, J:D.85
CA.131: 8 residues within 4Å:- Chain H: D.132, E.135
- Chain O: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.47, CA.89
5 PLIP interactions:2 interactions with chain V, 2 interactions with chain H, 1 interactions with chain O- Metal complexes: V:D.132, V:E.135, H:D.132, H:E.135, O:E.135
CA.132: 2 residues within 4Å:- Chain L: D.85
- Chain V: Q.87
2 PLIP interactions:2 interactions with chain L- Metal complexes: L:D.85, L:D.85
CA.137: 8 residues within 4Å:- Chain F: D.132, E.135
- Chain P: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.35, CA.95
5 PLIP interactions:2 interactions with chain F, 1 interactions with chain P, 2 interactions with chain W- Metal complexes: F:D.132, F:E.135, P:E.135, W:D.132, W:E.135
CA.138: 2 residues within 4Å:- Chain I: D.85
- Chain W: Q.87
2 PLIP interactions:2 interactions with chain I- Metal complexes: I:D.85, I:D.85
CA.143: 8 residues within 4Å:- Chain G: D.132, E.135
- Chain N: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.41, CA.83
5 PLIP interactions:1 interactions with chain G, 2 interactions with chain X, 2 interactions with chain N- Metal complexes: G:E.135, X:D.132, X:E.135, N:D.132, N:E.135
CA.144: 2 residues within 4Å:- Chain K: D.85
- Chain X: Q.87
2 PLIP interactions:2 interactions with chain K- Metal complexes: K:D.85, K:D.85
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Butts, C.A. et al., Directing noble metal ion chemistry within a designed ferritin protein. Biochemistry (2008)
- Release Date
- 2008-10-21
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x AU: GOLD ION(Non-covalent)
- 48 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Butts, C.A. et al., Directing noble metal ion chemistry within a designed ferritin protein. Biochemistry (2008)
- Release Date
- 2008-10-21
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A