SMTL ID : 3eu1.1

Crystal Structure determination of goat hemoglobin (Capra hircus) at 3 angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 16 residues within 4Å: Chain A: M.32, T.39, Y.42, F.43, H.45, H.58, K.61, A.65, L.83, H.87, L.91, V.93, N.97, F.98, L.101, L.136 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:T.39, A:Y.42, A:F.43, A:A.65, A:L.83, A:L.91, A:V.93, A:F.98, A:F.98, A:L.101, A:L.136 Salt bridges: A:H.45, A:H.58, A:K.61 pi-Cation interactions: A:H.58 HEM.2: 19 residues within 4Å: Chain B: L.30, T.37, F.40, F.41, H.43, F.44, H.62, K.65, V.66, S.69, L.87, L.90, H.91, L.95, V.97, N.101, F.102, L.105, L.140 17 PLIP interactions: 17 interactions with chain B, Hydrophobic interactions: B:L.30, B:T.37, B:F.40, B:F.41, B:F.41, B:F.41, B:V.66, B:V.66, B:L.87, B:L.95, B:V.97, B:L.105, B:L.140 Salt bridges: B:H.43 pi-Stacking: B:H.62, B:H.62 Metal complexes: B:H.91 HEM.3: 13 residues within 4Å: Chain C: Y.42, F.43, H.45, H.58, K.61, V.62, A.65, L.83, H.87, L.91, V.93, L.101, L.136 16 PLIP interactions: 16 interactions with chain C, Hydrophobic interactions: C:Y.42, C:F.43, C:F.43, C:F.43, C:K.61, C:V.62, C:A.65, C:L.83, C:L.91, C:V.93, C:L.101, C:L.101, C:L.136 Salt bridges: C:H.45, C:K.61 Metal complexes: C:H.87 HEM.4: 16 residues within 4Å: Chain D: T.37, F.40, F.41, H.43, H.62, K.65, V.66, S.69, L.87, L.90, H.91, L.95, V.97, N.101, L.105, L.140 16 PLIP interactions: 16 interactions with chain D, Hydrophobic interactions: D:T.37, D:F.40, D:F.41, D:F.41, D:F.41, D:V.66, D:L.87, D:L.87, D:L.95, D:V.97, D:L.105, D:L.140 Salt bridges: D:H.43, D:K.65 pi-Stacking: D:H.62 Metal complexes: D:H.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sathya Moorthy, P. et al., Purification, crystallization and preliminary X-ray diffraction studies on goat (Capra hircus) hemoglobin - a low oxygen affinity species. Protein Pept.Lett. (2009)

Release Date

2009-11-10

Peptides

Hemoglobin subunit alpha-1/2: AC
Hemoglobin subunit beta-A: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Hemoglobin subunit alpha-1/2

Hemoglobin subunit beta-A

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