SMTL ID : 3evk.1

Crystal structure of the metal-bound superoxide dismutase from Pyrobaculum aerophilum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.42, H.90, D.176, H.180 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.42, A:H.90, A:D.176, A:H.180, H2O.1 MN.2: 4 residues within 4Å: Chain B: H.42, H.90, D.176, H.180 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.42, B:H.90, B:D.176, B:H.180, H2O.3 MN.3: 4 residues within 4Å: Chain C: H.42, H.90, D.176, H.180 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.42, C:H.90, C:D.176, C:H.180, H2O.4 MN.4: 4 residues within 4Å: Chain D: H.42, H.90, D.176, H.180 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.42, D:H.90, D:D.176, D:H.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S., Crystal Structure of the Metal-bound Superoxide Dismutase from Pyrobaculum aerophilum and Comparison with the Metal-free Form. Bull.Korean Chem.Soc. (2008)

Release Date

2009-08-25

Peptides

Superoxide dismutase [Fe]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Superoxide dismutase [Fe]

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