SMTL ID : 3ewc.1

Crystal Structure of adenosine deaminase from Plasmodial vivax in complex with MT-coformycin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.42, H.44, H.226, D.310 Ligands: MCF.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.42, A:H.44, A:H.226, A:D.310

1 x MCF: (8R)-3-(5-S-METHYL-5-THIO-BETA-D-RIBOFURANOSYL)-3,6,7,8-TETRAHYDROIMIDAZO[4,5-D][1,3]DIAZEPIN-8-OL(Non-covalent)

MCF.2: 20 residues within 4Å: Chain A: H.42, H.44, L.47, L.85, F.88, V.89, S.129, I.170, D.172, T.173, G.174, H.175, G.200, G.201, H.226, E.229, H.253, D.310, D.311 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.44, A:G.201, A:E.229 Water bridges: A:S.129 pi-Stacking: A:H.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, M.C. et al., Structural and metabolic specificity of methylthiocoformycin for malarial adenosine deaminases. Biochemistry (2009)

Release Date

2009-09-22

Peptides

Adenosine deaminase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenosine deaminase