SMTL ID : 3eyt.1

Crystal structure of Thioredoxin-like superfamily protein SPOA0173

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-tetramer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: I.11, Q.12, Q.13, W.14, D.20 Chain D: Q.12, Q.100 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain A Hydrogen bonds: D:Q.100, D:Q.100, A:Q.12 Water bridges: A:W.14, A:Q.100 EDO.2: 7 residues within 4Å: Chain A: P.101, G.102, D.103, R.108 Chain D: Q.13, W.14, F.15 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain A Hydrogen bonds: D:Q.13, D:W.14, A:G.102, A:R.108 EDO.5: 5 residues within 4Å: Chain C: G.102, D.103, G.104, M.106, A.111 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:D.103, C:G.104 Water bridges: C:A.105

3 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 6 residues within 4Å: Chain A: Q.52, R.55, R.91, I.92, K.93, F.94 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Q.52, A:R.55, A:F.94 Hydrogen bonds: A:Q.52, A:K.93, A:F.94 ACY.4: 6 residues within 4Å: Chain B: Q.52, R.55, R.91, I.92, K.93, F.94 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:Q.52, B:R.55, B:F.94 Hydrogen bonds: B:Q.52, B:K.93, B:F.94 ACY.6: 6 residues within 4Å: Chain D: Q.52, R.55, R.91, I.92, K.93, F.94 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:Q.52, D:R.55, D:F.94 Hydrogen bonds: D:Q.52, D:K.93, D:F.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C. et al., Crystal structure of Thioredoxin-like superfamily protein SPOA0173. To be Published

Release Date

2008-11-04

Peptides

uncharacterized protein SPOA0173: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

uncharacterized protein SPOA0173