SMTL ID : 3f3s.2 (2 other biounits)

The Crystal Structure of Human Lambda-Crystallin, CRYL1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: G.10, S.11, G.12, V.13, I.14, Y.32, D.33, I.34, Q.38, C.91, V.92, P.93, E.94, L.98, K.99, I.102, S.119, T.120, S.121, H.142, P.143, N.145 Ligands: SO4.3, GOL.8 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.14, A:I.14, A:N.145 Hydrogen bonds: A:S.11, A:S.11, A:V.13, A:I.14, A:I.34, A:K.99, A:K.99, A:S.121, A:N.145 Water bridges: A:G.12, A:G.15, A:E.94

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: W.204, E.208, P.267, E.268, F.269, S.270, T.273 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.268, A:F.269, A:S.270, A:T.273, A:T.273 Water bridges: A:S.270, A:S.270 SO4.3: 9 residues within 4Å: Chain A: H.142, P.143, V.144, N.145, L.192, N.193, Q.196 Ligands: NAD.1, GOL.8 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:P.143, A:N.145, A:N.193, A:Q.196, A:Q.196 Salt bridges: A:H.142

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 1 residues within 4Å: Chain A: G.61 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: H.170, K.174 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: L.123, M.124, K.127 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 6 residues within 4Å: Chain A: E.202, R.205, L.206, T.262, F.263, G.264 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.202, A:G.264 Water bridges: A:T.262 GOL.8: 6 residues within 4Å: Chain A: S.121, N.193, Q.196, Y.197 Ligands: NAD.1, SO4.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.121, A:H.142, A:N.193, A:Q.196, A:Y.197, A:Y.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ugochukwu, E. et al., The Crystal Structure of Human Lambda-Crystallin, CRYL1. To be Published

Release Date

2008-11-25

Peptides

Lambda-crystallin homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Lambda-crystallin homolog

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