SMTL ID : 3f43.1

Crystal structure of a putative anti-sigma factor antagonist (tm1081) from thermotoga maritima at 1.59 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

homo-dimer

Ligands

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: H.37, K.40 Chain B: K.78 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: K.40, K.41, F.44 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: K.78 Chain B: H.37, F.68 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: K.78 Chain B: H.37, K.40 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain B: K.40, K.41, F.44 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: H.37, F.68 Chain B: K.78 Ligand excluded by PLIP

2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.4: 5 residues within 4Å: Chain A: K.17, V.19, I.24, M.26, I.115 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.17 1PE.9: 5 residues within 4Å: Chain B: K.17, V.19, I.24, M.26, I.115 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.17

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.5: 5 residues within 4Å: Chain A: D.106, R.107, I.108, V.109, K.110 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.110, A:I.111 PEG.10: 5 residues within 4Å: Chain B: D.106, R.107, I.108, V.109, K.110 2 PLIP interactions: 2 interactions with chain B Water bridges: B:K.110, B:I.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Putative anti-sigma factor antagonist TM1081 (TM1081) from THERMOTOGA MARITIMA at 1.59 A resolution. To be published

Release Date

2008-11-25

Peptides

Putative anti-sigma factor antagonist TM1081: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Putative anti-sigma factor antagonist TM1081

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