SMTL ID : 3f61.1

Crystal Structure of M. tuberculosis PknB Leu33Asp/Val222Asp double mutant in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 21 residues within 4Å: Chain A: L.20, G.21, F.22, G.23, S.26, V.28, A.41, K.43, V.75, M.95, E.96, V.98, T.102, K.143, A.145, N.146, M.148, M.158, D.159 Ligands: MG.2, MG.4 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:E.96, A:V.98 Water bridges: A:F.22, A:F.22, A:G.24, A:G.24, A:S.26, A:K.43, A:D.141, A:K.143, A:N.146 Salt bridges: A:K.43, A:K.143

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: K.43, N.146, D.159 Ligands: ADP.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.159, H2O.4, H2O.4 MG.3: 4 residues within 4Å: Chain A: R.104, K.143, P.144, A.145 No protein-ligand interaction detected (PLIP) MG.4: 5 residues within 4Å: Chain A: G.23, G.24, M.25, S.26 Ligands: ADP.1 No protein-ligand interaction detected (PLIP) MG.5: 5 residues within 4Å: Chain A: C.126, Q.127, N.130, A.270, R.273 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mieczkowski, C. et al., Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase. Embo J. (2008)

Release Date

2008-12-02

Peptides

Serine/threonine-protein kinase pknB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pknB