SMTL ID : 3f7c.1

Crystal structure of a duf416 family protein (maqu_0942) from marinobacter aquaeolei vt8 at 2.00 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 5 residues within 4Å: Chain A: W.17, R.18, Y.171, T.173 Chain B: K.175 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:W.17, B:K.175 Water bridges: A:R.18, A:R.18, B:K.175 Salt bridges: A:R.18, B:K.175, B:K.175 CIT.3: 5 residues within 4Å: Chain A: K.175 Chain B: W.17, R.18, Y.171, T.173 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:K.175, B:W.17 Water bridges: A:K.175, B:R.18, B:R.18 Salt bridges: A:K.175, A:K.175, B:R.18

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: E.19, N.107, P.111, K.113 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.19, A:N.107 Water bridges: A:E.19 NA.4: 4 residues within 4Å: Chain B: E.19, N.107, P.111, K.113 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.107, B:N.107 Water bridges: B:E.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of protein of unknown function (DUF416) (YP_958225.1) from MARINOBACTER AQUAEOLEI VT8 at 2.00 A resolution. To be published

Release Date

2008-11-25

Peptides

protein of unknown function (DUF416): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

protein of unknown function (DUF416)