- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMQ: (S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 2 residues within 4Å:- Chain A: R.62, K.67
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.62
- Salt bridges: A:K.67
SO4.3: 2 residues within 4Å:- Chain A: H.44, K.238
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:H.44, A:K.238
SO4.11: 2 residues within 4Å:- Chain B: R.62, K.67
2 PLIP interactions:2 interactions with chain B- Water bridges: B:R.62
- Salt bridges: B:K.67
SO4.12: 2 residues within 4Å:- Chain B: H.44, K.238
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:H.44, B:K.238
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 6 residues within 4Å:- Chain A: S.240, E.241
- Chain B: F.144, D.214, S.215
- Ligands: GOL.5
7 PLIP interactions:4 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:D.214, B:S.215
- Water bridges: B:R.147, B:R.147, A:E.241, A:D.246, A:D.246
GOL.5: 9 residues within 4Å:- Chain A: P.103, F.104, M.105, S.106, S.240
- Chain B: S.215, K.216
- Ligands: GOL.4, ACY.8
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:M.105, A:S.106, A:S.240, A:S.240
GOL.6: 5 residues within 4Å:- Chain A: S.226, S.227, R.229, T.230, P.231
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.226, A:R.229, A:T.230, A:T.230
GOL.7: 3 residues within 4Å:- Chain A: N.27, K.48, Y.49
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.27, A:Y.49, A:Y.49
- Water bridges: A:N.27
GOL.13: 6 residues within 4Å:- Chain A: F.144, D.214, S.215
- Chain B: S.240, E.241
- Ligands: GOL.14
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:S.215
- Water bridges: A:R.147, A:R.147, A:S.215, B:E.241, B:E.241, B:D.246
GOL.14: 9 residues within 4Å:- Chain A: S.215, K.216
- Chain B: P.103, F.104, M.105, S.106, S.240
- Ligands: GOL.13, ACY.17
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:M.105, B:S.106, B:S.240, B:S.240
GOL.15: 5 residues within 4Å:- Chain B: S.226, S.227, R.229, T.230, P.231
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.226, B:R.229, B:T.230
- Water bridges: B:T.230
GOL.16: 3 residues within 4Å:- Chain B: N.27, K.48, Y.49
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.27, B:Y.49, B:Y.49
- Water bridges: B:N.27
- 4 x ACY: ACETIC ACID(Non-functional Binders)
ACY.8: 4 residues within 4Å:- Chain A: M.105, S.106
- Chain B: S.215
- Ligands: GOL.5
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:S.215, A:S.106
ACY.9: 1 residues within 4Å:- Chain A: R.146
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.146
ACY.17: 4 residues within 4Å:- Chain A: S.215
- Chain B: M.105, S.106
- Ligands: GOL.14
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:S.215, B:S.106
- Water bridges: B:D.246
ACY.18: 1 residues within 4Å:- Chain B: R.146
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:R.146
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kasper, C. et al., Molecular mechanism of agonist recognition by the ligand-binding core of the ionotropic glutamate receptor 4. Febs Lett. (2008)
- Release Date
- 2008-12-09
- Peptides
- Glutamate receptor 4: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMQ: (S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 4 x ACY: ACETIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kasper, C. et al., Molecular mechanism of agonist recognition by the ligand-binding core of the ionotropic glutamate receptor 4. Febs Lett. (2008)
- Release Date
- 2008-12-09
- Peptides
- Glutamate receptor 4: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C